Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTCTTAGCCACAGCTGGAT
.(.((((((.(((((..((((&))))....))))).)))))).).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047419546
GeneSymbolTJAP1
Binding site686,709
Score0.846
Seed0
Au0.515
Energy-20.6
Binding len23
Me-6.826
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings3
Pairings in 3prime end6
PositionCDS
2D Structure