Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGGAGGGAGAGCCCCTTCAGGGTTCAGAGTGA
(((((((((((((((((((...&)))))))))).)))))..............)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001137675
GeneSymbolATXN1L
Binding site3042,3077
Score0.846
Seed1
Au0.368
Energy-26.7
Binding len35
Me-3.938
Phylopstem0.4981051505882352
Phylopflank0.6698899265
Longest consecutive pairings10
Position of longest consecutive pairings25
Pairings in 3prime end5
Position3UTR
2D Structure