Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCAGGAGTTTGAGACCAGC
..(((((((.(((((((((...&)))))))))...))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001139444
GeneSymbolTRAPPC3L
Binding site2635,2656
Score0.846
Seed1
Au0.484
Energy-19.5
Binding len21
Me-6.2
Phylopstem0.29350305555555556
Phylopflank0.34814818607142844
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end5
Position3UTR
2D Structure