Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTGGGAAGGGTAGTTTCAAGAGGAGTGG
(((((((((((((((.(((...&))).))))))).))))........)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001139444
GeneSymbolTRAPPC3L
Binding site2488,2517
Score0.846
Seed1
Au0.588
Energy-18.5
Binding len29
Me-4.171
Phylopstem1.9254048916666668
Phylopflank2.0680533675
Longest consecutive pairings7
Position of longest consecutive pairings18
Pairings in 3prime end4
Position3UTR
2D Structure