Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCACTTTGACACCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((...&.)))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001140
GeneSymbolALOX15
Binding site2393,2426
Score0.846
Seed1
Au0.412
Energy-27.0
Binding len22
Me-10.109
Phylopstem-0.3841666181818182
Phylopflank1.27456060375
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure