Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGGGGCCGCAGGACTGTC
..((((((((((((.(.(((.&))).).))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047419596
GeneSymbolZSCAN12
Binding site77,98
Score0.846
Seed1
Au0.441
Energy-20.9
Binding len21
Me-5.692
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end5
Position5UTR
2D Structure