Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACCATGCCCGGCTGTT
..(((((((.(((.....(((&))).....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047419596
GeneSymbolZSCAN12
Binding site4031,4050
Score0.846
Seed1
Au0.603
Energy-17.5
Binding len19
Me-8.025
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure