Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGCAATGTATTGGCATCTAAAAACTCCCTTATGAAACTGCCAGA
..((((((((((.(((((((..&))))))).))))............................)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001142269
GeneSymbolGGCX
Binding site5229,5276
Score0.846
Seed1
Au0.632
Energy-17.9
Binding len47
Me-6.246
Phylopstem0.7879908052631582
Phylopflank1.0729213250000003
Longest consecutive pairings7
Position of longest consecutive pairings40
Pairings in 3prime end6
Position3UTR
2D Structure