Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCAGGCTGGAGTTCAGTGG
((((((((((..(((((((.((&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001142269
GeneSymbolGGCX
Binding site3927,3950
Score1.0
Seed1
Au0.456
Energy-26.9
Binding len23
Me-10.109
Phylopstem-0.1669006909090909
Phylopflank-0.03742386125000001
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure