Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCCAGGAGGCTGAGGCATGAGAATCGCTTGGGCCCAGGAGGTGG
(((((((((((((((((((((.&))))))))))))....................))))).....)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001142269
GeneSymbolGGCX
Binding site2612,2659
Score0.923
Seed1
Au0.382
Energy-26.7
Binding len47
Me-3.938
Phylopstem-0.5101238934782607
Phylopflank-0.08739855250000003
Longest consecutive pairings12
Position of longest consecutive pairings35
Pairings in 3prime end7
Position3UTR
2D Structure