Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCAGCATCGCGCGCCGCAGCCGCGGCCCCGCAGC
((((.(((((((((((..(((&.))))))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001346744
GeneSymbolCBX7
Binding site150,187
Score0.846
Seed0
Au0.103
Energy-25.7
Binding len23
Me-8.057
Phylopstem0.2870923181818182
Phylopflank1.6567929612499999
Longest consecutive pairings14
Position of longest consecutive pairings8
Pairings in 3prime end6
Position5UTR
2D Structure