Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCAGGAAGGAGTCCCTGA
((..(((((((((((((.....&)))))))))))))..)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001142287
GeneSymbolSEMA4D
Binding site2986,3004
Score0.846
Seed0
Au0.397
Energy-23.6
Binding len18
Me-8.527
Phylopstem3.1728057692307696
Phylopflank3.6017805507500005
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end3
Position3UTR
2D Structure