Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ATCCAGCCAAGGATGCCAGTC
.(((((((((((.((((((...&))))))..))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001142287
GeneSymbolSEMA4D
Binding site4248,4269
Score0.846
Seed1
Au0.485
Energy-23.7
Binding len21
Me-5.082
Phylopstem-0.23595708333333323
Phylopflank0.006262272875000015
Longest consecutive pairings6
Position of longest consecutive pairings15
Pairings in 3prime end5
Position3UTR
2D Structure