Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCATTGCAATTTCTCACAGCTGTAC
.((((((((.((((((((((.&)).)))))))....).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047419638
GeneSymbolRGSL1
Binding site2135,2160
Score0.846
Seed1
Au0.603
Energy-18.7
Binding len25
Me-5.036
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure