Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTAAAATGTATGTCAGA
..((((((((((...((((...&))))...)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001142333
GeneSymbolRBFOX1
Binding site4514,4532
Score0.846
Seed1
Au0.735
Energy-15.1
Binding len18
Me-7.838
Phylopstem4.373894
Phylopflank2.43380058125
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure