Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCGTTGTGTGAACAA
...((.((((((((((((....&))))))))))))..)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001142334
GeneSymbolRBFOX1
Binding site2556,2573
Score0.846
Seed0
Au0.574
Energy-16.6
Binding len17
Me-8.415
Phylopstem2.1045811666666667
Phylopflank3.2916373137499995
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end4
Position3UTR
2D Structure