Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCAGGAAGGGGCCC
....(((((((((((((((...&))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001142349
GeneSymbolSCN4B
Binding site1539,1555
Score1.0
Seed0
Au0.368
Energy-26.6
Binding len16
Me-9.547
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure