Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTCCCAGGAGGCTTGGGTTTGGGTGCCCACAGTGGGAGCTGGTGT
(((((((((((...((((((..&.))))))....))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001142370
GeneSymbolPTPN18
Binding site2833,2879
Score0.846
Seed1
Au0.382
Energy-27.0
Binding len23
Me-9.43
Phylopstem-0.29330989090909093
Phylopflank-0.43969662499999995
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure