Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCACTCTGTCACCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((.((&.)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001142386
GeneSymbolPDK3
Binding site5730,5763
Score0.923
Seed1
Au0.426
Energy-27.1
Binding len24
Me-10.109
Phylopstem-0.30805918181818187
Phylopflank-0.28994268375
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure