Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGCCTAGTCTGGGGCCAGA
..((((((((...(((((((((&)))))))))...)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001142444
GeneSymbolEDC3
Binding site2582,2603
Score0.846
Seed1
Au0.382
Energy-27.4
Binding len21
Me-12.418
Phylopstem5.727853333333332
Phylopflank4.907837729999999
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end8
Position3UTR
2D Structure