Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGGGCCGTGTGCCAGC
..(((((((((..(.(((....&))).)..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001142448
GeneSymbolSPNS1
Binding site1830,1847
Score0.846
Seed1
Au0.324
Energy-16.4
Binding len17
Me-10.328
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure