Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGGGCCGTGTGCCAGC
..(((((((((..(.(((....&))).)..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001142450
GeneSymbolSPNS1
Binding site1980,1997
Score0.846
Seed1
Au0.324
Energy-16.4
Binding len17
Me-10.328
Phylopstem-0.7663092111111109
Phylopflank-0.12755196000000002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure