Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGGCTCTAGATCACATGGCATCAGGCTGGGGCAGAGG
..((.(((((..(((((((((.&)))))))))........................)))))..)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001142473
GeneSymbolFCMR
Binding site1255,1298
Score0.846
Seed0
Au0.426
Energy-20.4
Binding len43
Me-15.248
Phylopstem-0.35391922222222216
Phylopflank-0.03333488999999998
Longest consecutive pairings9
Position of longest consecutive pairings34
Pairings in 3prime end7
Position3UTR
2D Structure