Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCCGCGCCGAGCTGGCCGAGACCATCGTGTACGCCAGGG
.((((((.((((..........&.)))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_031455
GeneSymbolCCDC3
Binding site244,285
Score0.846
Seed1
Au0.221
Energy-16.4
Binding len13
Me-9.221
Phylopstem-0.07623999999999999
Phylopflank-0.27435194825000003
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure