Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGATGCAGAGGTTGAAGTGAGCCAA
...((((((((((((((((...&))))))))............)).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_031463
GeneSymbolHSDL1
Binding site3334,3364
Score0.846
Seed0
Au0.485
Energy-21.5
Binding len30
Me-6.515
Phylopstem0.8785517241379309
Phylopflank0.49061425500000005
Longest consecutive pairings8
Position of longest consecutive pairings22
Pairings in 3prime end5
Position3UTR
2D Structure