Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGGGTGGTCGGGG
.((((((.(((..(((((....&)))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_031464
GeneSymbolRPS6KL1
Binding site1064,1081
Score0.923
Seed1
Au0.324
Energy-18.8
Binding len17
Me-10.743
Phylopstem0.16719616666666667
Phylopflank-0.08279820800000004
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure