Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCAGGGGAGGGAGATCACCAGTGA
(((((((((((((((..((((.&))))..)))))))))....)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_031466
GeneSymbolTRAPPC9
Binding site4669,4695
Score0.846
Seed1
Au0.324
Energy-26.3
Binding len26
Me-4.171
Phylopstem4.453488368421052
Phylopflank3.20179545375
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end5
Position3UTR
2D Structure