Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTACCGTGGGATGTGGGGAGCCAGG
..(((((((((((((.((((((&))))))..))))....))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_031466
GeneSymbolTRAPPC9
Binding site6198,6224
Score0.808
Seed1
Au0.441
Energy-24.9
Binding len26
Me-5.19
Phylopstem4.792503294117647
Phylopflank5.008753951249999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure