Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGAAGGGACGGGTT
.(((.(.((((((((((((...&)))))))))))).).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_031466
GeneSymbolTRAPPC9
Binding site4570,4589
Score0.923
Seed0
Au0.441
Energy-24.3
Binding len19
Me-9.456
Phylopstem2.2635401666666666
Phylopflank3.70113394125
Longest consecutive pairings12
Position of longest consecutive pairings7
Pairings in 3prime end5
Position3UTR
2D Structure