Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCTGGAGACCCCGGTATCATCAGTGG
((((((..(((((((((((((.&)))))))))))....)).....)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_031472
GeneSymbolTRPT1
Binding site536,565
Score0.846
Seed0
Au0.412
Energy-20.6
Binding len29
Me-7.795
Phylopstem1.5659692411764707
Phylopflank2.8519135037500005
Longest consecutive pairings11
Position of longest consecutive pairings18
Pairings in 3prime end7
PositionCDS
2D Structure