Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCCAGGAGGCTGCGGGTC
.(((.((..(((((((((.((.&)))))))))))..)).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_031473
GeneSymbolIFT81
Binding site373,393
Score0.846
Seed0
Au0.353
Energy-22.9
Binding len20
Me-11.282
Phylopstem0.24348900444444446
Phylopflank-0.13896787824999995
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end6
Position5UTR
2D Structure