Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCGCAGGACCTGGGGCTGGAGCTGGAGGAGCTGGTGC
(((((((((((((((((((...&.)))))))..........)))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_031496
GeneSymbolPCDHA2
Binding site257,294
Score1.0
Seed1
Au0.309
Energy-24.7
Binding len31
Me-3.938
Phylopstem2.1821721379310337
Phylopflank1.5192708849999996
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure