Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTCGGGACGGGGGCTC
....(((((((((((((((((.&)))))))))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_031497
GeneSymbolPCDHA3
Binding site1417,1436
Score0.846
Seed0
Au0.309
Energy-23.8
Binding len19
Me-9.547
Phylopstem-0.5481913444444444
Phylopflank1.1936323624999998
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure