Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCGTTGGGCATTGCAGGCCCAGAGACCGAGCTGGTGG
(((((((((.(((((((((...&.)))))))))..))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_031852
GeneSymbolPCDHA7
Binding site2161,2198
Score0.846
Seed1
Au0.426
Energy-28.5
Binding len22
Me-5.18
Phylopstem0.7758187000000001
Phylopflank0.14839486374999994
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end5
PositionCDS
2D Structure