Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTAGCGCGGTGGGGAGTTGGTC
.(((((((((((.((((.((((&)))).).))).))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_031857
GeneSymbolPCDHA9
Binding site2337,2360
Score0.923
Seed1
Au0.353
Energy-22.4
Binding len23
Me-5.082
Phylopstem1.992013272727273
Phylopflank0.4948823837499999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure