Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTAGGGGTGCAGGAGGAGGACGGCAGCAACCGCAGCAGCAGC
((((.(((((((((((.....&.))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047419833
GeneSymbolNUP42
Binding site110,153
Score0.872
Seed0
Au0.426
Energy-26.0
Binding len18
Me-8.057
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end3
PositionCDS
2D Structure