Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCGCGGTGGGGAGCTGGTC
.(((((((((((.(((.((...&)).))).))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_031861
GeneSymbolPCDHA11
Binding site3815,3834
Score1.0
Seed1
Au0.294
Energy-23.6
Binding len19
Me-5.082
Phylopstem2.209098909090909
Phylopflank0.70360718875
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure