Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGAAGGGGAAAGACAGGAGCCAGGGTCA
.(((((((...(((((((.((&))...)))).....)))...))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_031861
GeneSymbolPCDHA11
Binding site3939,3967
Score0.846
Seed1
Au0.5
Energy-22.0
Binding len28
Me-8.917
Phylopstem0.03805831666666667
Phylopflank0.63145948875
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure