Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGGACAGAGAGGAAATTCAGGAACATAGTTTATTACTGACAGCCAGTGA
((((((((((((((((..(((.&)))..)))))))))............................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_031865
GeneSymbolPCDHA13
Binding site597,647
Score0.923
Seed1
Au0.529
Energy-25.8
Binding len50
Me-3.938
Phylopstem0.9100121022727277
Phylopflank-0.11088185249999993
Longest consecutive pairings9
Position of longest consecutive pairings36
Pairings in 3prime end5
PositionCDS
2D Structure