Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCCAGCGGCAATTTGGTGGTCAGAGAGCCGGCGG
(.(((((((((..(((((((((&)))))))))................)).))))))).).
Details
MiRNAhsa-miR-892b
RefseqIDNM_031882
GeneSymbolPCDHAC1
Binding site382,420
Score0.846
Seed1
Au0.382
Energy-25.4
Binding len38
Me-9.737
Phylopstem0.18838182888888882
Phylopflank1.4881918057499997
Longest consecutive pairings9
Position of longest consecutive pairings29
Pairings in 3prime end8
PositionCDS
2D Structure