Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGGAGATGGCTGCTAGCTGT
(((((((.(((((((((((...&))))))))).))..))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_031882
GeneSymbolPCDHAC1
Binding site2641,2664
Score0.923
Seed1
Au0.588
Energy-22.8
Binding len23
Me-6.251
Phylopstem0.20134941666666664
Phylopflank0.6488620249999999
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure