Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTACATACAGGAGAACAATTTGCCAGGTG
((((((((....((((((((..&))))))))..............)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_031883
GeneSymbolPCDHAC2
Binding site1425,1456
Score0.923
Seed1
Au0.529
Energy-19.6
Binding len31
Me-12.408
Phylopstem1.464572925
Phylopflank2.5112206412500004
Longest consecutive pairings8
Position of longest consecutive pairings23
Pairings in 3prime end6
PositionCDS
2D Structure