Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTCTCCGGAGAGTCGCCGGCGGTGCCAGGA
.((((((((....((..(((((&.)))))..))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_031891
GeneSymbolCDH20
Binding site368,400
Score0.846
Seed1
Au0.426
Energy-18.6
Binding len22
Me-12.73
Phylopstem0.995754
Phylopflank0.7979908600000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure