Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTGCCAGGTG
(((((((((.............&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_031892
GeneSymbolSH3KBP1
Binding site595,605
Score0.923
Seed1
Au0.382
Energy-16.2
Binding len10
Me-14.466
Phylopstem0.5235001444444445
Phylopflank0.47206423512499995
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure