Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTGCCAGGTT
(((((((((.............&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_031892
GeneSymbolSH3KBP1
Binding site4077,4087
Score0.846
Seed1
Au0.426
Energy-15.6
Binding len10
Me-14.466
Phylopstem4.015463333333333
Phylopflank4.907929079999998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure