Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCAGCCCGGGCTTCTTCCCTGGCGCCTCTGGAAGGGAGCTGGTGC
(((((((((((((((((((...&.))))..))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_031923
GeneSymbolTAF3
Binding site3024,3069
Score0.923
Seed1
Au0.353
Energy-28.2
Binding len23
Me-3.938
Phylopstem-0.05575038095238092
Phylopflank0.7875921849999998
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure