Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCGCCCTTGAATGCCAGGTC
(((((((((.(((.(..(((..&)))..).))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_031935
GeneSymbolHMCN1
Binding site4799,4820
Score0.923
Seed1
Au0.485
Energy-18.4
Binding len21
Me-6.27
Phylopstem3.8684558888888887
Phylopflank3.1406055862499995
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure