Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCGCAGGGAGCTGGAACAGGTGGCTCAGAAGGGGCGAGCCAGA
..(((((((((((((((((...&.)))))))))))...)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_031941
GeneSymbolUSHBP1
Binding site1952,1998
Score0.923
Seed1
Au0.368
Energy-26.5
Binding len22
Me-4.957
Phylopstem-0.10614369499999998
Phylopflank0.8683775924999999
Longest consecutive pairings11
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure