Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCGGGCTGAACTCAGTGCACTGTGTCCAGGG
.(((((.(((((.((((.....&.)))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_031965
GeneSymbolHASPIN
Binding site1701,1733
Score0.846
Seed0
Au0.456
Energy-17.6
Binding len17
Me-6.626
Phylopstem1.4952378000000002
Phylopflank2.1136262862499997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure