Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCCGAAATGAGAGGAGACTGGTC
.(((((((((((((.((((((.&))))))......)))))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_031965
GeneSymbolHASPIN
Binding site2445,2472
Score1.0
Seed1
Au0.515
Energy-24.1
Binding len27
Me-4.529
Phylopstem0.030354682142857154
Phylopflank0.42302240437500005
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end6
Position3UTR
2D Structure